Insertion junction: CLIP2.069118_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.069118
Chromosome:chromosome 4
Location:1850089
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g218000 MOC1 Monokaryotic Chloroplast1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTGCAAATAGGACGCTGCGGTAACGGACTCCGGACCTCGACCCGTTAGT
Internal bar code:CGTTTTCTCGCCTTCTCTACGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2365
LEAP-Seq percent confirming:87.3418
LEAP-Seq n confirming:69
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:79

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTCCTTTTGTTCGTGCAA
Suggested primer 2:GCAGCTGTAGAGTCGGGATC