Insertion junction: CLIP2.069122_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.069122
Chromosome:chromosome 16
Location:3273567
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g666250 TPT26,TPT27 (1 of 2) K15281 - solute carrier family 35 (SLC35D); UDP-N-acetylglucosamine transporter 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTTCCCCCCAGAACCCGGCCCCCAGAATCCACTCGCCCACCGCGCCCTT
Internal bar code:AGCGCACAATGAATGGGTCCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1427
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGGTTCATGACATGGCTC
Suggested primer 2:GTAAGAGGCCGATTCCCGAG