Insertion junction: CLIP2.069124_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.069124
Chromosome:chromosome 16
Location:6566490
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g674152 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTTAAGCAAAGGCGTTGCGTATTTTATTCATGGTCATTCAGGGCGCGC
Internal bar code:GGGGTTCTGCTTGTTCGTAGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1163
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:ATATGCGGGGGAAAGTGTGG
Suggested primer 2:ACAAGGGTTGGAGGTTTGCA