Insertion junction: CLIP2.069125_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.069125
Chromosome:chromosome 1
Location:3844844
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g025200 MMP4 Metalloproteinase of VMP family; (1 of 40) 3.4.24.38 - Gametolysin / Lysin 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGCCGTCGCTGCGTCGCCTTTGCAGTTTTTTAGTCGTAGCGGCGCATA
Internal bar code:CCGGTATCAGCAATTGTTGGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1108
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GCCGATAAGCGAAACGGTTC
Suggested primer 2:GGTCACTCCTCCTAGGCTGA