Insertion junction: CLIP2.069130_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.069130
Chromosome:chromosome 12
Location:6605969
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g538801 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACAGACTGGTGGTCAGTCTGTTCAGCTTGATGCTAGCGGCAACTCAACT
Internal bar code:CGTGGCAAGAGATAATCCGCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1225
LEAP-Seq percent confirming:63.6364
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGGCTACTATGTGCAGTA
Suggested primer 2:GGTGCGCACATACACGATTC