Insertion junction: CLIP2.069135_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.069135
Chromosome:plastome
Location:198332
Confidence (%):40
Locus systematic id Locus common name Defline Feature
CreCp.g802335 rpoC1,ChreCp069,2717049 (1 of 2) K03046 - DNA-directed RNA polymerase subunit beta' (rpoC); RNA polymerase beta' chain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTGTTAATAATGGCCAAATTTTTATTTTTTTTGATAATTTTGTGGTTA
Internal bar code:ATTTATTTAAAGTAAACATTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:183
LEAP-Seq percent confirming:2.7027
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:36
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:AAATGGATGGCCTGCAGGAA
Suggested primer 2:TGTAATGTGGTCAGCGGAGG