Insertion junction: CLIP2.069136_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.069136
Chromosome:chromosome 11
Location:1876671
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre11.g467792 (1 of 752) IPR027417 - P-loop containing nucleoside triphosphate hydrolase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATATTTGAATCGGCCGCACATGCGCACACGGCGTTGCGCCAGGCGTTC
Internal bar code:TACCAAACACGATTTGGGAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:816
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GCATTATGCGCCCCGATTTT
Suggested primer 2:TGGGAACAGGTTGTGGCTTT