Insertion junction: CLIP2.069140_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.069140
Chromosome:chromosome 7
Location:5585430
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g352000 (1 of 16) IPR011044 - Quinoprotein amine dehydrogenase, beta chain-like 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGCTAAATGTCGACAGCAACCAACTACGGTAGTCAACTGCTGGCGATA
Internal bar code:GTTAAAAAGGGACAAGGTTGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3832
LEAP-Seq percent confirming:92.5
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:GCTATCGAGGAGCCAGGTTC
Suggested primer 2:TGTCGTACTTCCAACCCACG