Insertion junction: CLIP2.069141_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.069141
Chromosome:chromosome 2
Location:7976942
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g145133 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCGCAATAATCGAGTTATCACAAGAAGAGGCAGTAGCACTTGGTAGTGG
Internal bar code:TAGCGGAAGCTCCACCCGTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1246
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:GCGAACGCATCATCCACTTC
Suggested primer 2:CTGCTTTTACGATGACGGCG