Insertion junction: CLIP2.069148_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.069148
Chromosome:chromosome 11
Location:3763255
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre11.g479200 (1 of 5) PF00995 - Sec1 family (Sec1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTTTGGGCTGGTATCTAGAACCCCCTCCCCACCCCGACTTGGCCGCCAC
Internal bar code:GGTAACAGTATTAAGTCCTGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:273
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGGGAAGAGTGGAGGCAG
Suggested primer 2:GAAGTCACACGCACACACAC