Insertion junction: CLIP2.069149_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.069149
Chromosome:chromosome 4
Location:2149083
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g219950 (1 of 5) IPR000504//IPR012677 - RNA recognition motif domain // Nucleotide-binding alpha-beta plait domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCGCTCTCGACCACAACGCGGGCAGCTCACCAAGTGTGCGGTGGGCATG
Internal bar code:CTATTGTCCTTTAGAGTTGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3850
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:CACTTTGTGACTGGCATGCC
Suggested primer 2:GGGAGAGGGTAAGGTTGTGC