Insertion junction: CLIP2.069172_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.069172
Chromosome:chromosome 9
Location:3598352
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g396772 Similar to Gametolysin and Autolysin; (1 of 4) IPR003882//IPR008752 - Pistil-specific extensin-like protein // Peptidase M11, gametolysin 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTCCTTCTCGCACCTGCGCCCTTGCTATCCCGCCTACCGAGCCACAGC
Internal bar code:TATTGGGCAAAACTAACACTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:819
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGCATGTGCGTGAGTTGG
Suggested primer 2:TCGTGACCGTGACCAGAAAG