Insertion junction: CLIP2.069174_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.069174
Chromosome:chromosome 12
Location:3138323
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g500650 RNB2 (1 of 1) PTHR23355//PTHR23355:SF39 - RIBONUCLEASE // SUBFAMILY NOT NAMED; chloroplast RNase II 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGCGCAAACTGCAAACTCGTGAGCAGCCTCCCATCTACTCAGTGGACA
Internal bar code:GGTGTCGAGTACGCGGATGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2212
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:88
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:88

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGTGCGACTGATGACTGT
Suggested primer 2:GTGCTGGGAAGTCCTCGAAA