Insertion junction: CLIP2.069175_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.069175
Chromosome:chromosome 9
Location:1114329
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g401650 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGTGGACTCACTGGCGTGTTGCGCGCGGGTGCATTTGTGGGCATTGTCC
Internal bar code:AAACCATATAATTTTATGAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1085
LEAP-Seq percent confirming:95.8333
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:GCACAACGGCAAATCAACCT
Suggested primer 2:GGGAAGGGGTCAAATGAGGG