Insertion junction: CLIP2.069189_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.069189
Chromosome:chromosome 7
Location:4945971
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g800844 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGAGCATACATAAAGCATGGGTTTATCCATGTGGCCCCAGTAGCTAAC
Internal bar code:CGCCACCTCGAGGGCTCTGCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2179
LEAP-Seq percent confirming:90.4412
LEAP-Seq n confirming:123
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:136

Suggested primers for confirmation by PCR

Suggested primer 1:TCCGGCAAGAAAGTCCAGTC
Suggested primer 2:TTTTGTGACTGCTCGCTTGC