Insertion junction: CLIP2.069191_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.069191
Chromosome:chromosome 2
Location:4047248
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g103150 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGTATTACACTAATTACAGCTGGGATCCGAGACCGCAACGGGGTTGGG
Internal bar code:GAGGTCTCGGGGATTAGGGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:147
LEAP-Seq percent confirming:45.4545
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGTTGCGCGTGTCTTTCA
Suggested primer 2:GCGTAATCGGAGGGTAGGTG