Insertion junction: CLIP2.069195_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.069195
Chromosome:chromosome 2
Location:4658253
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g107650 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCTCGAGACTGGTGCCGTGGTATCTGTGGACACGCCGTGCATGCGGCG
Internal bar code:TTATCCGAATTCATGATCCTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1318
LEAP-Seq percent confirming:76.4706
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCCCTGCATTTAAGTAGC
Suggested primer 2:CCAGCTGGTAATCCTAGGCG