Insertion junction: CLIP2.069197_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.069197
Chromosome:chromosome 4
Location:691282
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g217953 (1 of 2) PTHR15241:SF0 - TRANSFORMER-2 SEX-DETERMINING PROTEIN 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTCCTCATCAGCCCTCTCTGCATTCAATCTGACCAAACCCCGCATTCC
Internal bar code:TATAAATATACTCGCGCGGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:992
LEAP-Seq percent confirming:72.2222
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGGCGAGAACTGTTTGGA
Suggested primer 2:TTAACCTGTGACGCCTGACC