Insertion junction: CLIP2.069199_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.069199
Chromosome:chromosome 16
Location:1504631
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g653000 (1 of 1) K18404 - tudor domain-containing protein 3 (TDRD3) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCTTCAATACCACATGTCCCCACCGCTTGGCCGCGCACTCACCCGCCCC
Internal bar code:CACTCGGAACTTATTTCAGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2874
LEAP-Seq percent confirming:52.7778
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:TGACCCAGCAATGACAGTGG
Suggested primer 2:TTCTTGGAGTCGGAGCAACC