Insertion junction: CLIP2.069215_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.069215
Chromosome:chromosome 11
Location:3382953
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g477000 SNRK2D snRK1 family in Chlamydomonas, subgroup 2; (1 of 41) IPR000719//IPR011009 - Protein kinase domain // Protein kinase-like domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTGCTCCTATCGCTACTACGGTATGTCGGCAAGGGCGCATCGGTGCCG
Internal bar code:CGGGTGCTGGGACATCGAAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1618
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:GCATAATACGCACGCACAGG
Suggested primer 2:TGCACAGTGTCGATCCTTCC