Insertion junction: CLIP2.069228_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.069228
Chromosome:chromosome 3
Location:3201107
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g165200 APG7 Autophagy-related protein, ubiquitin-activating enzyme E1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTGGCTGGTATACGGTAACGCCGGATGAGTTCCTGTGCCGAGACATCAC
Internal bar code:ATTTTGACAGGTATTGGAAAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1411
LEAP-Seq percent confirming:96.2963
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:GGCGCTATCTATCTACCGGC
Suggested primer 2:ATTGATGAGTGCTGACGGGG