Insertion junction: CLIP2.069238_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.069238
Chromosome:chromosome 16
Location:2197992
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g801904 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGTGTGCAGCAATGCATAAGCCTCGGTCGGTGGCTGATGTGTCTACAT
Internal bar code:AGCTTTGACGAATTTTTTTACG

Confirmation - LEAP-Seq

LEAP-Seq distance:875
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GACAAGCAGGGGCAAAACTG
Suggested primer 2:CGCTAGTAGCAGGGATGTCG