Insertion junction: CLIP2.069255_4

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.069255
Chromosome:chromosome 16
Location:4977667
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g686300 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGCCTGGATCCCAGCCCAGGTTGCATGCTCATGAGTGACTTGTCGGGC
Internal bar code:AAGAATTGCTGGTTTCGTATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2401
LEAP-Seq percent confirming:89.7436
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:AATGTCGAGGACGCCCATTT
Suggested primer 2:AGGTAGGAGGCAGGAGACAG