Insertion junction: CLIP2.069273_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.069273
Chromosome:chromosome 5
Location:2185454
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g237450 PSRP1 Plastid-specific ribosomal protein 1; (1 of 1) PTHR33231//PTHR33231:SF1 - FAMILY NOT NAMED // 30S RIBOSOMAL PROTEIN-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGGAGCAGTTTCCAGTTCTTATCAAGCTGCAAGGGCAGTGCCCCGCCG
Internal bar code:AGTCTATCTAGGCGCACTCACG

Confirmation - LEAP-Seq

LEAP-Seq distance:4817
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:TTAGTGTCCATGTGCTGCGT
Suggested primer 2:CGTTTGTGGTGCTTGTGAGG