Insertion junction: CLIP2.069289_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.069289
Chromosome:chromosome 5
Location:2711306
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g240350 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTCAGTGCGTGGCCTGGCCCCCCCCCGCCCTCCACCTCACTCGCCCTA
Internal bar code:CATTTGTAGGTTCGACGATTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1291
LEAP-Seq percent confirming:28.5714
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGAGGTTTGTAGAGGGGC
Suggested primer 2:ATCAACGTGCGACTGAAGGT