Insertion junction: CLIP2.069297_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.069297
Chromosome:chromosome 11
Location:1843059
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre11.g467400 (1 of 3) IPR000104//IPR001859 - Antifreeze protein, type I // Trypanosoma cruzi ribosomal protein P2-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGGAAAGAGGTGGGCAAGCGGTTGGAACGAGGTCGGAAAGCTGTTGGA
Internal bar code:CAGATCCGTTGCACTATGATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:537
LEAP-Seq percent confirming:5.17241
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:55
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:TGATGGGGATGGAGTGGGAT
Suggested primer 2:CGGCAAACTTGTACACCACG