| Insertion cassette: | CIB2 |
| Side of cassette: | 5' |
| Strand: | + |
| Strain: | CLIP2.069311 |
| Chromosome: | chromosome 4 |
| Location: | 1780559 |
| Confidence (%): | 80 |
| Locus systematic id | Locus common name | Defline | Feature |
|---|---|---|---|
| Cre04.g800462 | (1 of 1) IPR020996 - Type III secretion system, AvrPto | 3'UTR |
Insertion site details | |
| Expected flanking sequence (starting at cassette; orientation from cassette outwards): | CACTTGGGGGCTGCTGGGGCGGGCAGGCAAGTGGGGGTTGGCGTCGTCAG |
| Internal bar code: | CCGTCCGGCGGGTGTTTCAGAA |
Confirmation - LEAP-Seq | |
| LEAP-Seq distance: | 346 |
| LEAP-Seq percent confirming: | 100.0 |
| LEAP-Seq n confirming: | 19 |
| LEAP-Seq n nonconfirming: | 0 |
| LEAP-Seq n unique pos: | 19 |
Suggested primers for confirmation by PCR | |
| Suggested primer 1: | GTTGGAGTTGGATGGGGAGG |
| Suggested primer 2: | CAAGCAGTAGCCACCAGTCA |