Insertion junction: CLIP2.069320_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.069320
Chromosome:chromosome 2
Location:1783294
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre02.g086650 SMC2,DIV35 (1 of 1) K06674 - structural maintenance of chromosome 2 (SMC2); Structural Maintenance of Chromosomes protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGTATGACGCCTGAGGGGGCGCCTGAGGGGATGACCGACCGGGATGAC
Internal bar code:AGTCGAGGGGCGAAGAAGTAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:81
LEAP-Seq percent confirming:4.54545
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CGGAAGATCGCCAATTGCAG
Suggested primer 2:CGCTGGCACATCTGTTATGC