Insertion junction: CLIP2.069338_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.069338
Chromosome:chromosome 17
Location:5566629
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g739600 (1 of 1) PF03988 - Repeat of Unknown Function (DUF347) (DUF347) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCCCCGCCCCCCCCAGCGGCGGCCCAGCACCCACCCGTAATACGTCTA
Internal bar code:GATTTCTTGGTTTGTTCCCATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1720
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:GGCATGGTCACCAAGTACGA
Suggested primer 2:GGAACGCCTGTCAAGATCCA