Insertion junction: CLIP2.069344_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.069344
Chromosome:chromosome 12
Location:2346150
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g508000 TIC40 (1 of 5) IPR006636 - Heat shock chaperonin-binding; Putative chloroplast enveloppe protein 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGACAAAGCACTCAGCCTGCATGCAGCTCTGAGTTTGGGAAATTCCTG
Internal bar code:TGTTGGAAGGGCGATCTAAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2749
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GATTCGTCCAGAGCACAGCT
Suggested primer 2:AGGCTCCTCCTTGTAGGGAG