Insertion junction: CLIP2.069345_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.069345
Chromosome:chromosome 16
Location:2355206
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g659150 (1 of 7) PF00076//PF14259 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // RNA recognition motif (a.k.a. RRM, RBD, or RNP domain) (RRM_6) 3'UTR
Cre16.g659200 CYP36,CYP742A1 (1 of 1) 1.14.13.157 - 1,8-cineole 2-exo-monooxygenase / CYP3A4; Cytochrome P450, CYP4 superfamily 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGAGGCTGCCAGCATTTCATGAATGCAAGGGGCATGTGCACCCCTGGC
Internal bar code:ATAGCGAGACCCGTGCACTAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:547
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTGGTGGTTTGAAGCGTG
Suggested primer 2:CAGCCCACTCTTCCTTGAGG