Insertion junction: CLIP2.069358_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.069358
Chromosome:chromosome 13
Location:2817168
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g801539 (1 of 1) PTHR14140:SF27 - PROTEIN SHISA-5 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGAGAACCCTGCGCGGGGGTGCCCCGGCGGTACCCTCTGCCATCCTTA
Internal bar code:ATGACTATTCAGAGATGTGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:5217
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:80
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:88

Suggested primers for confirmation by PCR

Suggested primer 1:CCCATTTCTCAGGGGTCACC
Suggested primer 2:CCGGAATGGTTTCTCTGCCT