Insertion junction: CLIP2.069360_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.069360
Chromosome:chromosome 13
Location:5105787
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g606850 (1 of 1) K14548 - U3 small nucleolar RNA-associated protein 4 (UTP4, CIRH1A) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAATGTGCTGGCAACTGGCAATGCAGTAGCTGTCTGCATGCGTCCGGAGT
Internal bar code:TTTAGCCACATTGCAATGGCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:4893
LEAP-Seq percent confirming:99.2064
LEAP-Seq n confirming:125
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:126

Suggested primers for confirmation by PCR

Suggested primer 1:TTAACGAGCGCTGTCACACT
Suggested primer 2:TACCGTCTTGTGGTGAACGG