Insertion junction: CLIP2.069362_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.069362
Chromosome:chromosome 13
Location:1974330
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g576550 (1 of 93) 6.3.2.19 - Transferred entry: 2.3.2.23, 2.3.2.27 and 6.2.1.45 3'UTR
Cre13.g801525 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTTTGACTCCTGCATAGCAAAATGCGCTCATATGTTTGTGAGCAGGGC
Internal bar code:GCGCCAGGTAATCAGGAAGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:4020
LEAP-Seq percent confirming:99.2424
LEAP-Seq n confirming:131
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:132

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGTTGAGGATGAACGGCA
Suggested primer 2:GGGAGAGCTGGCCTTGATTT