Insertion junction: CLIP2.069365_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.069365
Chromosome:chromosome 17
Location:2396237
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g714300 5'UTR
Cre17.g714350 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTGGTTTGCACTGAATTAAGTATACATGCATCAGGCTCCAAGTTTGGCA
Internal bar code:TACCGCTAAGGCTTCGGTATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:4574
LEAP-Seq percent confirming:93.6508
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:63

Suggested primers for confirmation by PCR

Suggested primer 1:ATACAGGAGTAGCTGGGGCA
Suggested primer 2:GCGATAGGAAGGGACTCACG