Insertion junction: CLIP2.069378_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.069378
Chromosome:chromosome 10
Location:6162116
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g462400 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGCATGCACAGGTGCATCCAGTGCGCAGTGCGCAGCAGTGCCGGCTCCT
Internal bar code:GTTGGACAATTAACTAGCGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1953
LEAP-Seq percent confirming:96.5517
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:ACCCTTGATGACAGCAGTGG
Suggested primer 2:CGGCTGTGACACACTACTGT