Insertion junction: CLIP2.069381_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.069381
Chromosome:chromosome 9
Location:5213917
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g406950 (1 of 5) IPR000104//IPR016024 - Antifreeze protein, type I // Armadillo-type fold 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCGCGCGGTGCTTGAGGTATGCCACACCCAGCAGCTTCTTCGCGACCC
Internal bar code:CTTAGGCCTCTGAAAGAGCGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:3345
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:TAACACTCGCACACAGGGAC
Suggested primer 2:AACGGGCCAGGAGCAATAAA