Insertion junction: CLIP2.069391_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.069391
Chromosome:chromosome 14
Location:608293
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g611900 3'UTR
lncRNA_TCONS_00189627 3'UTR
lncRNA_TCONS_00191355 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCACAACTCGACTCAGGGTCAACAGAATGCCTCAGTCTGCGTACATCCA
Internal bar code:CGAGAATCGATCAGTTTTACCA

Confirmation - LEAP-Seq

LEAP-Seq distance:3932
LEAP-Seq percent confirming:81.0127
LEAP-Seq n confirming:64
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:79

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTAGTTCTGTGCACCCTG
Suggested primer 2:ACGCCGACTCTTGTGTTGAT