Insertion junction: CLIP2.069398_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.069398
Chromosome:chromosome 9
Location:5461351
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre09.g408676 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGTTGGCGGCGTCAGAGGTGGACAGTTCGTGCTGCAGCGGCGGTGGCGG
Internal bar code:CGGATTTTGCGAACAGCTATCA

Confirmation - LEAP-Seq

LEAP-Seq distance:695
LEAP-Seq percent confirming:10.7143
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGCAGCACCATCAACAAC
Suggested primer 2:TGCCAGTCCAAACACGTACA