Insertion junction: CLIP2.069399_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.069399
Chromosome:chromosome 12
Location:7290049
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g558450 SPD1 Spermidine synthase; (1 of 1) K00797 - spermidine synthase (speE, SRM) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAAACTTTTATGCCCCCACAGCAACAACCCCCTTCTCATCTATCATTG
Internal bar code:TGCTCATTTATTTGTTACCCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1706
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:AAATTCACACTCGCGCACAC
Suggested primer 2:CCAACCTCAAGCACACAAGC