Insertion junction: CLIP2.069405_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.069405
Chromosome:chromosome 16
Location:2248444
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g658350 3'UTR
Cre16.g658400 FDX2 Apoferredoxin; (1 of 6) K02639 - ferredoxin (petF) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGATGACACCGGAGTAGTGCGTCTCAGGGGTGGTGTGTCCTGCATTTT
Internal bar code:ATGTAGTTGGTTGTATTCCCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:4963
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGACCATGGACGAGGATG
Suggested primer 2:TGCTCCAAACCTCAATCGCT