Insertion junction: CLIP2.069407_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.069407
Chromosome:chromosome 13
Location:4729486
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre13.g604250 (1 of 1) IPR002889//IPR003882//IPR013994 - Carbohydrate-binding WSC // Pistil-specific extensin-like protein // Carbohydrate-binding WSC, subgroup intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCCCTGTCCGTGCCTGCCTGCCTGCATGCCTGCCTGCCTGCCACGCCA
Internal bar code:CGCAGCTTCATCGGTAGGCGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:124
LEAP-Seq percent confirming:46.6667
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGCAGCCCTGGTACACAT
Suggested primer 2:CGCTGTTTGTGAGGTAGGGT