Insertion junction: CLIP2.069415_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.069415
Chromosome:chromosome 3
Location:4357668
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g174700 (1 of 1) 3.1.22.1 - Deoxyribonuclease II / Lysosomal DNase II 3'UTR
Cre03.g174750 CYN26,CYN26B,CYN26-2 (1 of 1) PTHR11071//PTHR11071:SF244 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE // CYCLOPHILIN-LIKE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FAMILY PROTEIN; Cyclophilin 26-2 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGAGTGTGCACGTTGTGAGCGGCGGTTAGGCTGCGCAACCGCACGAGCA
Internal bar code:TGTAGATTAAAACTTCGCGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:777
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GGGGTGGGACTCATTGAAGG
Suggested primer 2:GGTTGTGGTGTTCGTGTTGG