Insertion junction: CLIP2.069420_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.069420
Chromosome:chromosome 6
Location:5702894
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g288100 (1 of 1) PTHR12829//PTHR12829:SF1 - N6-ADENOSINE-METHYLTRANSFERASE // SUBFAMILY NOT NAMED 3'UTR
Cre06.g288150 (1 of 1) PTHR23023//PTHR23023:SF119 - DIMETHYLANILINE MONOOXYGENASE // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGTATGTACAGTAAGACTGACATGCATGTCGCGAAGCGTGAGGGTGAGC
Internal bar code:TCTAGGCATGAACATTAATGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1183
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:TCCCGGTAAGTTCTCTCGGT
Suggested primer 2:CATCTGATGAGTTGCTGCGC