Insertion junction: CLIP2.069420_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.069420
Chromosome:chromosome 6
Location:5702895
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g288100 (1 of 1) PTHR12829//PTHR12829:SF1 - N6-ADENOSINE-METHYLTRANSFERASE // SUBFAMILY NOT NAMED 3'UTR
Cre06.g288150 (1 of 1) PTHR23023//PTHR23023:SF119 - DIMETHYLANILINE MONOOXYGENASE // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGGCGTCTAATCTCTCCCACGTGTCTAAGTGTCAACGCCACACCCAGC
Internal bar code:TCTAGGCATGAACATTAATGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1724
LEAP-Seq percent confirming:63.6364
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CATCTGATGAGTTGCTGCGC
Suggested primer 2:TCCCGGTAAGTTCTCTCGGT