Insertion junction: CLIP2.069422_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.069422
Chromosome:chromosome 17
Location:3110925
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g720500 (1 of 5) 2.7.1.68 - 1-phosphatidylinositol-4-phosphate 5-kinase / Type I PIP kinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGTATACATACATGCGTACCGTATACAGGTTGGGGTCCGTGCTCCCGCC
Internal bar code:ACGCGCGGATTTTATGGGGAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:5356
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:76
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:76

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCAGTCCCACATCCTGTC
Suggested primer 2:GCCTATGCGTCACTCCCTAC