Insertion junction: CLIP2.069435_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.069435
Chromosome:chromosome 16
Location:5310280
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g683850 GDPD1,GDP1 Glycerophosphoryl diester phosphodiesterase family protein; (1 of 5) PTHR23344//PTHR23344:SF7 - GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE // GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATACAGTACATAAGCAAGTTGAGGGCCGCTGAGTGTTGCAGCCCACAGC
Internal bar code:GAGGTTTGATCAGACGGGCTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2548
LEAP-Seq percent confirming:97.8022
LEAP-Seq n confirming:89
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:91

Suggested primers for confirmation by PCR

Suggested primer 1:CTTTCATGTGGCCCATCCCT
Suggested primer 2:TGTAGCCGTGCTTCTTCAGG