Insertion junction: CLIP2.069435_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.069435
Chromosome:chromosome 16
Location:5310280
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g683850 GDPD1,GDP1 Glycerophosphoryl diester phosphodiesterase family protein; (1 of 5) PTHR23344//PTHR23344:SF7 - GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE // GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCGTCCTGGCCTCAGGGCGCCAACCGCACCGTCGGTATCTACCCCGAG
Internal bar code:TCTGAATCGTGTCGAGGACCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2587
LEAP-Seq percent confirming:81.9672
LEAP-Seq n confirming:100
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:122

Suggested primers for confirmation by PCR

Suggested primer 1:TGTAGCCGTGCTTCTTCAGG
Suggested primer 2:CTTTCATGTGGCCCATCCCT