Insertion junction: CLIP2.069443_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.069443
Chromosome:chromosome 3
Location:3368309
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g166350 (1 of 1) IPR017849//IPR017850 - Alkaline phosphatase-like, alpha/beta/alpha // Alkaline-phosphatase-like, core domain 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCGTTCTGCCCAGGGGGGCTCCTCGGGCGGTGGGCCCTGCTTTCGTTTT
Internal bar code:GTTCACCTAACAAATATGGCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1661
LEAP-Seq percent confirming:5.55556
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:51
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:CGCCACACGTGTCACAAAAT
Suggested primer 2:AGATTCCATCTAGCGTGCGG