Insertion junction: CLIP2.069450_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.069450
Chromosome:chromosome 10
Location:5632801
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g458800 SRR31 Scavenger receptor cysteine rich (SRCR) protein; (1 of 20) IPR001190//IPR017448 - SRCR domain // SRCR-like domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCAGTTGGATGGATGCTATTGGATGGCCTAGCCGCACGGCCTAGCCGG
Internal bar code:GGTATTTTTGACTGGAGGCCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2741
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TCTTCCAAACAACACCGCCT
Suggested primer 2:CTAGCCCTTGTTCCCACTGG